Status
The genome of Neolecta
irregularis DAH-1 was not sequenced at JGI, rather it was
acquired from Jason Stajich in June, 2016. Please cite Nguyen et
al., 2017 if you use this genome in your work.
Summary statistics for the Neolecta irregularis DAH-1 v1.0
release are below.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 14.59 |
| Sequencing read coverage depth | NA |
| # of contigs | 7101 |
| # of scaffolds | 7101 |
| # of scaffolds >= 2Kbp | 1039 |
| Scaffold N50 | 225 |
| Scaffold L50 (Mbp) | 0.02 |
| # of gaps | 0 |
| % of scaffold length in gaps | 0.0% |
| Three largest Scaffolds (Mbp) | 0.13, 0.13, 0.09 |
| Gene Models | ExternalModels | |
| length (bp) of: | average | median |
| gene | 1852 | 1559 |
| transcript | 1680 | 1416 |
| exon | 318 | 209 |
| intron | 42 | 39 |
| description: | ||
| protein length (aa) | 430 | 347 |
| exons per gene | 5.28 | 5 |
| # of gene models | 6674 |
Genome Reference(s)
Please cite the following publication(s) if you use the data from this genome in your research:
Nguyen TA, Cissé OH, Yun Wong J, Zheng P, Hewitt D, Nowrousian M, Stajich JE, Jedd G
Innovation and constraint leading to complex multicellularity in the Ascomycota.
Nat Commun. 2017 Feb 8;8():14444. doi: 10.1038/ncomms14444
Nguyen TA, Cissé OH, Yun Wong J, Zheng P, Hewitt D, Nowrousian M, Stajich JE, Jedd G
Innovation and constraint leading to complex multicellularity in the Ascomycota.
Nat Commun. 2017 Feb 8;8():14444. doi: 10.1038/ncomms14444
Funding
This project was not sequenced at the JGI.
