Status
[February 2021] The Aspergillus spiritus DTO 241-G7 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 26.17 |
| Sequencing read coverage depth | 86.8x |
| # of contigs | 763 |
| # of scaffolds | 744 |
| # of scaffolds >= 2Kbp | 663 |
| Scaffold N50 | 105 |
| Scaffold L50 (Mbp) | 0.08 |
| # of gaps | 19 |
| % of scaffold length in gaps | 0.0% |
| Three largest Scaffolds (Mbp) | 0.34, 0.28, 0.26 |
| ESTs | Data set | # sequences total | # mapped to genome | % mapped to genome |
| EstClusters | ESTclusters | 37470 | 35290 | 94.2% |
| Ests | est.fasta | 188399792 | 184202845 | 97.8% |
| Gene Models | FilteredModels1 | |
| length (bp) of: | average | median |
| gene | 1870 | 1619 |
| transcript | 1705 | 1474 |
| exon | 543 | 326 |
| intron | 79 | 59 |
| description: | ||
| protein length (aa) | 452 | 371 |
| exons per gene | 3.14 | 3 |
| # of gene models | 10176 |
Collaborators
Links
Funding
The work conducted by the U.S. Department of Energy Joint Genome
Institute, a DOE Office of Science User Facility, is supported by
the Office of Science of the U.S. Department of Energy under
Contract No. DE-AC02-05CH11231.
